BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C07SP1|AL427598
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1113 1745 0.0
>3x_Contig1113
Length = 4340
Score = 1745 bits (879), Expect = 0.0
Identities = 880/881 (99%)
Strand = Plus / Plus
Query: 1 taaataaacactttctcacttatagatactttctcatagatcaacttcctatactattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 taaataaacactttctcacttatagatactttctcatagatcaacttcctatactattag 177
Query: 61 gctgtaatgtcgccataaacgcctaagacgaatgttgctcatacggctgttagatatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gctgtaatgtcgccataaacgcctaagacgaatgttgctcatacggctgttagatatccc 237
Query: 121 acctatatcacgtgatagacatgctttatttagttggtgttgaaaatccttcgaaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 acctatatcacgtgatagacatgctttatttagttggtgttgaaaatccttcgaaagata 297
Query: 181 gaaaaaaaaattcaatcaacattaaaagcgtaataacaggacaaacatattatgtatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaaaaaaaaattcaatcaacattaaaagcgtaataacaggacaaacatattatgtatcaa 357
Query: 241 gacgaccagagcgagtaaaccaagtctcttaaaccagaatttaacgccaagtttggtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gacgaccagagcgagtaaaccaagtctcttaaaccagaatttaacgccaagtttggtgaa 417
Query: 301 atacaataatcatgacgaaaggtttggtgaggataagactagctagattcggaaggaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atacaataatcatgacgaaaggtttggtgaggataagactagctagattcggaaggaaac 477
Query: 361 ataccccagtatacaacatagttgttaccaacaaacataaggcgttgaataggaaaccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ataccccagtatacaacatagttgttaccaacaaacataaggcgttgaataggaaaccaa 537
Query: 421 ttgaagtattaggaacatacaacccaatcccaaaaccattaacgaagaaagaggttaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttgaagtattaggaacatacaacccaatcccaaaaccattaacgaagaaagaggttaaac 597
Query: 481 aaggtgttgttcctactaaagatgtggaattagacttcggaagagctaaatactggatcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aaggtgttgttcctactaaagatgtggaattagacttcggaagagctaaatactggatcg 657
Query: 541 gtgttggtgctcaacctagtgatacggtaacaagactattgagaaaagctggaatcctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtgttggtgctcaacctagtgatacggtaacaagactattgagaaaagctggaatcctgg 717
Query: 601 atgaaaattggggaaagacctacacaagtagtagggttgttattgaacctaggaaagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atgaaaattggggaaagacctacacaagtagtagggttgttattgaacctaggaaagaag 777
Query: 661 tctttgaagaatagaccagctgttccgattactgtattaaaagcggtatatcaataatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tctttgaagaatagaccagctgttccgattactgtattaaaagcggtatatcaataatca 837
Query: 721 gggcataaatcaccatctcccaaggctttcttwcggtcaagaactcatgtatataggctt 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 838 gggcataaatcaccatctcccaaggctttcttacggtcaagaactcatgtatataggctt 897
Query: 781 aaattgataagaggaattcgggcactttttccggtcataaaccaatgtagtagttacata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aaattgataagaggaattcgggcactttttccggtcataaaccaatgtagtagttacata 957
Query: 841 cacttaacagcttggccccatgcggtaaaattgaagtgatt 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 cacttaacagcttggccccatgcggtaaaattgaagtgatt 998
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6825
Number of Sequences: 1807
Number of extensions: 6825
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)